WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09F5.1b.1 Sequence Name  C09F5.1b.1
Length (nt)  1346   Chromosome Location  III: 660142-662706
Chromosome . Primary Identifier  III Chromosome Location . Start  660142
Chromosome Location . End  662706 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09F5.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015647 C09F5.1 C09F5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09F5.1b C09F5.1b 1134   III: 660161-660195

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09F5.1b.1 660142 662706 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77887   54   III: 660142-660195 Caenorhabditis elegans
Exon77889   210   III: 660447-660656 Caenorhabditis elegans
Exon77891   301   III: 660859-661159 Caenorhabditis elegans
Exon77893   138   III: 661243-661380 Caenorhabditis elegans
Exon77895   148   III: 661756-661903 Caenorhabditis elegans
Exon77897   142   III: 661968-662109 Caenorhabditis elegans
Exon77898   353   III: 662354-662706 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09F5.1b.1 660142 662706 1

1 Sequence

Length
1346

1 Sequence Ontology Term

Identifier Name Description
transcript