WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C24A1.3.1 Sequence Name  C24A1.3.1
Length (nt)  2743   Chromosome Location  III: 692509-696472
Chromosome . Primary Identifier  III Chromosome Location . Start  692509
Chromosome Location . End  696472 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C24A1.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016030 sel-15 C24A1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C24A1.3 C24A1.3 2544   III: 692556-693059

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C24A1.3.1 692509 696472 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77934   551   III: 692509-693059 Caenorhabditis elegans
Exon77935   118   III: 693103-693220 Caenorhabditis elegans
Exon77936   96   III: 693470-693565 Caenorhabditis elegans
Exon77937   68   III: 693617-693684 Caenorhabditis elegans
Exon77938   201   III: 693731-693931 Caenorhabditis elegans
Exon77939   482   III: 693979-694460 Caenorhabditis elegans
Exon77940   351   III: 694513-694863 Caenorhabditis elegans
Exon77941   133   III: 695125-695257 Caenorhabditis elegans
Exon77942   439   III: 695427-695865 Caenorhabditis elegans
Exon77943   112   III: 696029-696140 Caenorhabditis elegans
Exon77944   192   III: 696281-696472 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C24A1.3.1 692509 696472 -1

1 Sequence

Length
2743

1 Sequence Ontology Term

Identifier Name Description
transcript