WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C24A1.2a.1 Sequence Name  C24A1.2a.1
Length (nt)  1653   Chromosome Location  III: 706334-715822
Chromosome . Primary Identifier  III Chromosome Location . Start  706334
Chromosome Location . End  715822 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C24A1.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016029 elf-1 C24A1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C24A1.2a C24A1.2a 1263   III: 706429-706593

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C24A1.2a.1 706334 715822 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon77955   260   III: 706334-706593 Caenorhabditis elegans
Exon77957   117   III: 707153-707269 Caenorhabditis elegans
Exon77959   100   III: 708093-708192 Caenorhabditis elegans
Exon77962   183   III: 709054-709236 Caenorhabditis elegans
Exon77965   132   III: 713284-713415 Caenorhabditis elegans
Exon77967   455   III: 714179-714633 Caenorhabditis elegans
Exon77970   406   III: 715417-715822 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C24A1.2a.1 706334 715822 1

1 Sequence

Length
1653

1 Sequence Ontology Term

Identifier Name Description
transcript