WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T17H7.4b.1 Sequence Name  T17H7.4b.1
Length (nt)  2244   Chromosome Location  III: 727207-746538
Chromosome . Primary Identifier  III Chromosome Location . Start  727207
Chromosome Location . End  746538 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T17H7.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003936 pat-12 T17H7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T17H7.4b T17H7.4b 1812   III: 727639-727705

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T17H7.4b.1 727207 746538 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78003   499   III: 727207-727705 Caenorhabditis elegans
Exon78017   117   III: 727948-728064 Caenorhabditis elegans
Exon78030   310   III: 728117-728426 Caenorhabditis elegans
Exon78045   163   III: 728882-729044 Caenorhabditis elegans
Exon78060   101   III: 729093-729193 Caenorhabditis elegans
Exon78081   106   III: 729580-729685 Caenorhabditis elegans
Exon78096   159   III: 729986-730144 Caenorhabditis elegans
Exon78110   129   III: 730309-730437 Caenorhabditis elegans
Exon78145   21   III: 731906-731926 Caenorhabditis elegans
Exon78224   21   III: 739327-739347 Caenorhabditis elegans
Exon78232   99   III: 739660-739758 Caenorhabditis elegans
Exon78240   99   III: 739808-739906 Caenorhabditis elegans
Exon78248   135   III: 739955-740089 Caenorhabditis elegans
Exon78259   198   III: 742985-743182 Caenorhabditis elegans
Exon78269   87   III: 746452-746538 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T17H7.4b.1 727207 746538 -1

1 Sequence

Length
2244

1 Sequence Ontology Term

Identifier Name Description
transcript