WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T17H7.4c.1 Sequence Name  T17H7.4c.1
Length (nt)  2121   Chromosome Location  III: 727639-746538
Chromosome . Primary Identifier  III Chromosome Location . Start  727639
Chromosome Location . End  746538 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T17H7.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003936 pat-12 T17H7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T17H7.4c T17H7.4c 2121   III: 727639-727705

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T17H7.4c.1 727639 746538 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78015   67   III: 727639-727705 Caenorhabditis elegans
Exon78018   117   III: 727948-728064 Caenorhabditis elegans
Exon78031   310   III: 728117-728426 Caenorhabditis elegans
Exon78046   163   III: 728882-729044 Caenorhabditis elegans
Exon78061   101   III: 729093-729193 Caenorhabditis elegans
Exon78082   106   III: 729580-729685 Caenorhabditis elegans
Exon78097   159   III: 729986-730144 Caenorhabditis elegans
Exon78111   129   III: 730309-730437 Caenorhabditis elegans
Exon78117   93   III: 730592-730684 Caenorhabditis elegans
Exon78125   87   III: 731532-731618 Caenorhabditis elegans
Exon78135   129   III: 731676-731804 Caenorhabditis elegans
Exon78146   21   III: 731906-731926 Caenorhabditis elegans
Exon78225   21   III: 739327-739347 Caenorhabditis elegans
Exon78233   99   III: 739660-739758 Caenorhabditis elegans
Exon78241   99   III: 739808-739906 Caenorhabditis elegans
Exon78249   135   III: 739955-740089 Caenorhabditis elegans
Exon78260   198   III: 742985-743182 Caenorhabditis elegans
Exon78270   87   III: 746452-746538 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T17H7.4c.1 727639 746538 -1

1 Sequence

Length
2121

1 Sequence Ontology Term

Identifier Name Description
transcript