WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42G9.6b.1 Sequence Name  F42G9.6b.1
Length (nt)  2532   Chromosome Location  III: 778212-783305
Chromosome . Primary Identifier  III Chromosome Location . Start  778212
Chromosome Location . End  783305 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42G9.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018364 dagl-2 F42G9.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42G9.6b F42G9.6b 2052   III: 778682-779052

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42G9.6b.1 778212 783305 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78328   841   III: 778212-779052 Caenorhabditis elegans
Exon78333   377   III: 779587-779963 Caenorhabditis elegans
Exon78336   353   III: 780506-780858 Caenorhabditis elegans
Exon78338   78   III: 780978-781055 Caenorhabditis elegans
Exon78340   164   III: 781624-781787 Caenorhabditis elegans
Exon78343   172   III: 782349-782520 Caenorhabditis elegans
Exon78346   182   III: 782578-782759 Caenorhabditis elegans
Exon78349   144   III: 782824-782967 Caenorhabditis elegans
Exon78352   116   III: 783012-783127 Caenorhabditis elegans
Exon78355   105   III: 783201-783305 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42G9.6b.1 778212 783305 -1

1 Sequence

Length
2532

1 Sequence Ontology Term

Identifier Name Description
transcript