WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42G9.6c.1 Sequence Name  F42G9.6c.1
Length (nt)  2451   Chromosome Location  III: 778221-783305
Chromosome . Primary Identifier  III Chromosome Location . Start  778221
Chromosome Location . End  783305 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42G9.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018364 dagl-2 F42G9.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42G9.6c F42G9.6c 1980   III: 778682-779052

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42G9.6c.1 778221 783305 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78329   832   III: 778221-779052 Caenorhabditis elegans
Exon78334   377   III: 779587-779963 Caenorhabditis elegans
Exon78337   353   III: 780506-780858 Caenorhabditis elegans
Exon78341   164   III: 781624-781787 Caenorhabditis elegans
Exon78344   172   III: 782349-782520 Caenorhabditis elegans
Exon78347   188   III: 782578-782765 Caenorhabditis elegans
Exon78350   144   III: 782824-782967 Caenorhabditis elegans
Exon78353   116   III: 783012-783127 Caenorhabditis elegans
Exon78356   105   III: 783201-783305 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42G9.6c.1 778221 783305 -1

1 Sequence

Length
2451

1 Sequence Ontology Term

Identifier Name Description
transcript