WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0412.2.1 Sequence Name  B0412.2.1
Length (nt)  1645   Chromosome Location  III: 811844-813773
Chromosome . Primary Identifier  III Chromosome Location . Start  811844
Chromosome Location . End  813773 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0412.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000903 daf-7 B0412.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0412.2 B0412.2 1053   III: 811938-812066

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0412.2.1 811844 813773 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78426   223   III: 811844-812066 Caenorhabditis elegans
Exon78427   240   III: 812194-812433 Caenorhabditis elegans
Exon78428   182   III: 812495-812676 Caenorhabditis elegans
Exon78429   313   III: 812724-813036 Caenorhabditis elegans
Exon78430   687   III: 813087-813773 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0412.2.1 811844 813773 1

1 Sequence

Length
1645

1 Sequence Ontology Term

Identifier Name Description
transcript