WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y6D11A.1.1 Sequence Name  Y6D11A.1.1
Length (nt)  1764   Chromosome Location  III: 860198-862198
Chromosome . Primary Identifier  III Chromosome Location . Start  860198
Chromosome Location . End  862198 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y6D11A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000202 exos-4.2 Y6D11A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y6D11A.1 Y6D11A.1 726   III: 860202-860401

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y6D11A.1.1 860198 862198 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78541   204   III: 860198-860401 Caenorhabditis elegans
Exon78542   1560   III: 860639-862198 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y6D11A.1.1 860198 862198 1

1 Sequence

Length
1764

1 Sequence Ontology Term

Identifier Name Description
transcript