WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y6D11A.2.1 Sequence Name  Y6D11A.2.1
Length (nt)  1046   Chromosome Location  III: 862306-865398
Chromosome . Primary Identifier  III Chromosome Location . Start  862306
Chromosome Location . End  865398 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y6D11A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021170 arx-4 Y6D11A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y6D11A.2 Y6D11A.2 906   III: 862310-862383

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y6D11A.2.1 862306 865398 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78543   78   III: 862306-862383 Caenorhabditis elegans
Exon78544   94   III: 862798-862891 Caenorhabditis elegans
Exon78545   54   III: 862939-862992 Caenorhabditis elegans
Exon78546   236   III: 863043-863278 Caenorhabditis elegans
Exon78547   584   III: 864815-865398 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y6D11A.2.1 862306 865398 1

1 Sequence

Length
1046

1 Sequence Ontology Term

Identifier Name Description
transcript