WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F23H11.8c.1 Sequence Name  F23H11.8c.1
Length (nt)  1996   Chromosome Location  III: 919700-926314
Chromosome . Primary Identifier  III Chromosome Location . Start  919700
Chromosome Location . End  926314 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F23H11.8c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003969 pef-1 F23H11.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F23H11.8c F23H11.8c 1929   III: 919700-919846

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F23H11.8c.1 919700 926314 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78727   147   III: 919700-919846 Caenorhabditis elegans
Exon78731   287   III: 919905-920191 Caenorhabditis elegans
Exon78735   676   III: 920974-921649 Caenorhabditis elegans
Exon78740   642   III: 923414-924055 Caenorhabditis elegans
Exon78743   128   III: 925017-925144 Caenorhabditis elegans
Exon78747   116   III: 926199-926314 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F23H11.8c.1 919700 926314 -1

1 Sequence

Length
1996

1 Sequence Ontology Term

Identifier Name Description
transcript