WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12B5.5.1 Sequence Name  T12B5.5.1
Length (nt)  519   Chromosome Location  III: 938869-939437
Chromosome . Primary Identifier  III Chromosome Location . Start  938869
Chromosome Location . End  939437 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12B5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020452 fbxa-22 T12B5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12B5.5 T12B5.5 519   III: 938869-939195

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T12B5.5.1 938869 939437 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78722   327   III: 938869-939195 Caenorhabditis elegans
Exon78723   192   III: 939246-939437 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T12B5.5.1 938869 939437 1

1 Sequence

Length
519

1 Sequence Ontology Term

Identifier Name Description
transcript