WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12B5.8.1 Sequence Name  T12B5.8.1
Length (nt)  1861   Chromosome Location  III: 939941-943476
Chromosome . Primary Identifier  III Chromosome Location . Start  939941
Chromosome Location . End  943476 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12B5.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020455 fbxa-59 T12B5.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12B5.8 T12B5.8 951   III: 940879-941094

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T12B5.8.1 939941 943476 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78724   321   III: 939941-940261 Caenorhabditis elegans
Exon78727   787   III: 940308-941094 Caenorhabditis elegans
Exon78729   622   III: 941136-941757 Caenorhabditis elegans
Exon78738   131   III: 943346-943476 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T12B5.8.1 939941 943476 -1

1 Sequence

Length
1861

1 Sequence Ontology Term

Identifier Name Description
transcript