WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12B5.11.1 Sequence Name  T12B5.11.1
Length (nt)  1962   Chromosome Location  III: 948493-950670
Chromosome . Primary Identifier  III Chromosome Location . Start  948493
Chromosome Location . End  950670 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12B5.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020457 fbxa-67 T12B5.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12B5.11 T12B5.11 966   III: 949363-949572

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T12B5.11.1 948493 950670 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78745   236   III: 948493-948728 Caenorhabditis elegans
Exon78748   798   III: 948775-949572 Caenorhabditis elegans
Exon78750   619   III: 949619-950237 Caenorhabditis elegans
Exon78751   84   III: 950304-950387 Caenorhabditis elegans
Exon78752   225   III: 950446-950670 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T12B5.11.1 948493 950670 -1

1 Sequence

Length
1962

1 Sequence Ontology Term

Identifier Name Description
transcript