WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12B5.2.1 Sequence Name  T12B5.2.1
Length (nt)  1146   Chromosome Location  III: 956334-957901
Chromosome . Primary Identifier  III Chromosome Location . Start  956334
Chromosome Location . End  957901 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12B5.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020449 fbxa-54 T12B5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12B5.2 T12B5.2 1017   III: 956357-956457

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T12B5.2.1 956334 957901 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78769   124   III: 956334-956457 Caenorhabditis elegans
Exon78770   84   III: 956525-956608 Caenorhabditis elegans
Exon78771   622   III: 956923-957544 Caenorhabditis elegans
Exon78772   316   III: 957586-957901 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T12B5.2.1 956334 957901 1

1 Sequence

Length
1146

1 Sequence Ontology Term

Identifier Name Description
transcript