WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R06B10.4a.1 Sequence Name  R06B10.4a.1
Length (nt)  2509   Chromosome Location  III: 991881-1001931
Chromosome . Primary Identifier  III Chromosome Location . Start  991881
Chromosome Location . End  1001931 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R06B10.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006615 trp-2 R06B10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R06B10.4a R06B10.4a 2451   III: 991881-992092

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R06B10.4a.1 991881 1001931 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78811   212   III: 991881-992092 Caenorhabditis elegans
Exon78813   73   III: 992887-992959 Caenorhabditis elegans
Exon78815   99   III: 993330-993428 Caenorhabditis elegans
Exon78817   345   III: 994050-994394 Caenorhabditis elegans
Exon78819   183   III: 995001-995183 Caenorhabditis elegans
Exon78821   90   III: 995548-995637 Caenorhabditis elegans
Exon78823   145   III: 995720-995864 Caenorhabditis elegans
Exon78825   132   III: 996503-996634 Caenorhabditis elegans
Exon78827   140   III: 996860-996999 Caenorhabditis elegans
Exon78829   190   III: 997392-997581 Caenorhabditis elegans
Exon78831   88   III: 997666-997753 Caenorhabditis elegans
Exon78833   126   III: 998147-998272 Caenorhabditis elegans
Exon78835   245   III: 998748-998992 Caenorhabditis elegans
Exon78837   72   III: 999169-999240 Caenorhabditis elegans
Exon78839   74   III: 999285-999358 Caenorhabditis elegans
Exon78841   48   III: 999663-999710 Caenorhabditis elegans
Exon78846   129   III: 1001596-1001724 Caenorhabditis elegans
Exon78849   118   III: 1001814-1001931 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R06B10.4a.1 991881 1001931 1

1 Sequence

Length
2509

1 Sequence Ontology Term

Identifier Name Description
transcript