WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y34F4.6.1 Sequence Name  Y34F4.6.1
Length (nt)  674   Chromosome Location  III: 1008391-1009713
Chromosome . Primary Identifier  III Chromosome Location . Start  1008391
Chromosome Location . End  1009713 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y34F4.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00189956 clc-27 Y34F4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y34F4.6 Y34F4.6 591   III: 1008454-1008562

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y34F4.6.1 1008391 1009713 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78860   172   III: 1008391-1008562 Caenorhabditis elegans
Exon78861   47   III: 1008610-1008656 Caenorhabditis elegans
Exon78862   98   III: 1008744-1008841 Caenorhabditis elegans
Exon78863   142   III: 1008891-1009032 Caenorhabditis elegans
Exon78864   215   III: 1009499-1009713 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y34F4.6.1 1008391 1009713 1

1 Sequence

Length
674

1 Sequence Ontology Term

Identifier Name Description
transcript