WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y34F4.4.3 Sequence Name  Y34F4.4.3
Length (nt)  1647   Chromosome Location  III: 1023221-1025414
Chromosome . Primary Identifier  III Chromosome Location . Start  1023221
Chromosome Location . End  1025414 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y34F4.4.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021339 clc-25 Y34F4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y34F4.4 Y34F4.4 759   III: 1023283-1023784

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y34F4.4.3 1023221 1025414 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78880   564   III: 1023221-1023784 Caenorhabditis elegans
Exon78884   95   III: 1023829-1023923 Caenorhabditis elegans
Exon78887   893   III: 1024383-1025275 Caenorhabditis elegans
Exon78889   95   III: 1025320-1025414 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y34F4.4.3 1023221 1025414 -1

1 Sequence

Length
1647

1 Sequence Ontology Term

Identifier Name Description
transcript