WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:BE0003N10.3b.1 Sequence Name  BE0003N10.3b.1
Length (nt)  1974   Chromosome Location  III: 1046569-1052723
Chromosome . Primary Identifier  III Chromosome Location . Start  1046569
Chromosome Location . End  1052723 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
BE0003N10.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015268 fbxo-11.2 BE0003N10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:BE0003N10.3b BE0003N10.3b 1974   III: 1046569-1046629

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:BE0003N10.3b.1 1046569 1052723 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78938   61   III: 1046569-1046629 Caenorhabditis elegans
Exon78940   99   III: 1046675-1046773 Caenorhabditis elegans
Exon78943   148   III: 1047502-1047649 Caenorhabditis elegans
Exon78946   484   III: 1048519-1049002 Caenorhabditis elegans
Exon78948   397   III: 1049972-1050368 Caenorhabditis elegans
Exon78950   191   III: 1051292-1051482 Caenorhabditis elegans
Exon78952   523   III: 1051844-1052366 Caenorhabditis elegans
Exon78955   71   III: 1052653-1052723 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:BE0003N10.3b.1 1046569 1052723 -1

1 Sequence

Length
1974

1 Sequence Ontology Term

Identifier Name Description
transcript