WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y92C3B.2a.1 Sequence Name  Y92C3B.2a.1
Length (nt)  1715   Chromosome Location  III: 1062794-1076555
Chromosome . Primary Identifier  III Chromosome Location . Start  1062794
Chromosome Location . End  1076555 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y92C3B.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006697 uaf-1 Y92C3B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y92C3B.2a Y92C3B.2a 1491   III: 1063018-1063149

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y92C3B.2a.1 1062794 1076555 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78974   356   III: 1062794-1063149 Caenorhabditis elegans
Exon78977   321   III: 1064642-1064962 Caenorhabditis elegans
Exon78978   120   III: 1067833-1067952 Caenorhabditis elegans
Exon78980   233   III: 1070423-1070655 Caenorhabditis elegans
Exon78981   159   III: 1072387-1072545 Caenorhabditis elegans
Exon78983   296   III: 1074180-1074475 Caenorhabditis elegans
Exon78984   230   III: 1076326-1076555 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y92C3B.2a.1 1062794 1076555 -1

1 Sequence

Length
1715

1 Sequence Ontology Term

Identifier Name Description
transcript