WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y92C3B.3a.2 Sequence Name  Y92C3B.3a.2
Length (nt)  2094   Chromosome Location  III: 1078253-1080483
Chromosome . Primary Identifier  III Chromosome Location . Start  1078253
Chromosome Location . End  1080483 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y92C3B.3a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004277 rab-18 Y92C3B.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y92C3B.3a Y92C3B.3a 582   III: 1079682-1080211

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y92C3B.3a.2 1078253 1080483 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78986   1959   III: 1078253-1080211 Caenorhabditis elegans
Exon78992   56   III: 1080287-1080342 Caenorhabditis elegans
Exon78997   79   III: 1080405-1080483 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y92C3B.3a.2 1078253 1080483 -1

1 Sequence

Length
2094

1 Sequence Ontology Term

Identifier Name Description
transcript