WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y92C3B.3b.1 Sequence Name  Y92C3B.3b.1
Length (nt)  828   Chromosome Location  III: 1079466-1080481
Chromosome . Primary Identifier  III Chromosome Location . Start  1079466
Chromosome Location . End  1080481 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y92C3B.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004277 rab-18 Y92C3B.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y92C3B.3b Y92C3B.3b 612   III: 1079682-1079906

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y92C3B.3b.1 1079466 1080481 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon78987   441   III: 1079466-1079906 Caenorhabditis elegans
Exon78989   254   III: 1079958-1080211 Caenorhabditis elegans
Exon78993   56   III: 1080287-1080342 Caenorhabditis elegans
Exon78995   77   III: 1080405-1080481 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y92C3B.3b.1 1079466 1080481 -1

1 Sequence

Length
828

1 Sequence Ontology Term

Identifier Name Description
transcript