WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58B6.2.1 Sequence Name  F58B6.2.1
Length (nt)  2650   Chromosome Location  III: 1103208-1111944
Chromosome . Primary Identifier  III Chromosome Location . Start  1103208
Chromosome Location . End  1111944 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58B6.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019030 exc-6 F58B6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58B6.2 F58B6.2 2532   III: 1103224-1103352

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58B6.2.1 1103208 1111944 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon79081   145   III: 1103208-1103352 Caenorhabditis elegans
Exon79082   444   III: 1104125-1104568 Caenorhabditis elegans
Exon79083   183   III: 1105043-1105225 Caenorhabditis elegans
Exon79084   98   III: 1105394-1105491 Caenorhabditis elegans
Exon79085   89   III: 1107001-1107089 Caenorhabditis elegans
Exon79086   179   III: 1107144-1107322 Caenorhabditis elegans
Exon79087   497   III: 1108009-1108505 Caenorhabditis elegans
Exon79088   93   III: 1109114-1109206 Caenorhabditis elegans
Exon79089   151   III: 1109318-1109468 Caenorhabditis elegans
Exon79090   450   III: 1110223-1110672 Caenorhabditis elegans
Exon79091   321   III: 1111624-1111944 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58B6.2.1 1103208 1111944 1

1 Sequence

Length
2650

1 Sequence Ontology Term

Identifier Name Description
transcript