WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y71D11A.2 Sequence Name  Y71D11A.2
Length (nt)  720   Chromosome Location  III: 1143190-1143315
Chromosome . Primary Identifier  III Chromosome Location . Start  1143190
Chromosome Location . End  1143315
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71D11A.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24602 SMR-1 26.0 239 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00058140
WBRNAi00083715
WBRNAi00073401
WBRNAi00073402
WBRNAi00083611
WBRNAi00083804
WBRNAi00037765
WBRNAi00083545

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y71D11A.2 1143190 1143315 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004891 smr-1 Y71D11A.2 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y71D11A.2 1143190 1143315 1
CDS:Y71D11A.2 1143394 1143471 1
CDS:Y71D11A.2 1143537 1143633 1
CDS:Y71D11A.2 1143702 1143826 1
CDS:Y71D11A.2 1144851 1145144 1

1 Sequence

Length
720

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y71D11A.2.1 Y71D11A.2.1 805   III: 1143172-1145211