WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y119D3B.13.1 Sequence Name  Y119D3B.13.1
Length (nt)  776   Chromosome Location  III: 1182056-1184942
Chromosome . Primary Identifier  III Chromosome Location . Start  1182056
Chromosome Location . End  1184942 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y119D3B.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022490 nspg-8 Y119D3B.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y119D3B.13 Y119D3B.13 723   III: 1182060-1182093

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y119D3B.13.1 1182056 1184942 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon79228   38   III: 1182056-1182093 Caenorhabditis elegans
Exon79229   152   III: 1182161-1182312 Caenorhabditis elegans
Exon79230   184   III: 1183151-1183334 Caenorhabditis elegans
Exon79231   98   III: 1183386-1183483 Caenorhabditis elegans
Exon79232   304   III: 1184639-1184942 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y119D3B.13.1 1182056 1184942 1

1 Sequence

Length
776

1 Sequence Ontology Term

Identifier Name Description
transcript