WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y119D3B.12a.3 Sequence Name  Y119D3B.12a.3
Length (nt)  1252   Chromosome Location  III: 1202546-1207339
Chromosome . Primary Identifier  III Chromosome Location . Start  1202546
Chromosome Location . End  1207339 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y119D3B.12a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022489 Y119D3B.12 Y119D3B.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y119D3B.12a Y119D3B.12a 1020   III: 1202551-1202619

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y119D3B.12a.3 1202546 1207339 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon79216   74   III: 1202546-1202619 Caenorhabditis elegans
Exon79226   111   III: 1202665-1202775 Caenorhabditis elegans
Exon79234   307   III: 1202839-1203145 Caenorhabditis elegans
Exon79242   111   III: 1203599-1203709 Caenorhabditis elegans
Exon79250   413   III: 1205337-1205749 Caenorhabditis elegans
Exon79253   90   III: 1206853-1206942 Caenorhabditis elegans
Exon79264   146   III: 1207194-1207339 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y119D3B.12a.3 1202546 1207339 1

1 Sequence

Length
1252

1 Sequence Ontology Term

Identifier Name Description
transcript