WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y119D3B.12a Sequence Name  Y119D3B.12a
Length (nt)  1020   Chromosome Location  III: 1202551-1202619
Chromosome . Primary Identifier  III Chromosome Location . Start  1202551
Chromosome Location . End  1202619
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y119D3B.12a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27458 Y119D3B.12, isoform a 40.5 339 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00055507
WBRNAi00020000
WBRNAi00019999

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y119D3B.12a 1202551 1202619 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022489 Y119D3B.12 Y119D3B.12 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y119D3B.12a 1202551 1202619 1
CDS:Y119D3B.12a 1202665 1202775 1
CDS:Y119D3B.12a 1202839 1203145 1
CDS:Y119D3B.12a 1203599 1203709 1
CDS:Y119D3B.12a 1205337 1205749 1
CDS:Y119D3B.12a 1206853 1206861 1

1 Sequence

Length
1020

1 Sequence Ontology Term

Identifier Name Description
CDS  

5 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y119D3B.12a.4 Y119D3B.12a.4 1435   III: 1202546-1207335
Transcript:Y119D3B.12a.3 Y119D3B.12a.3 1252   III: 1202546-1207339
Transcript:Y119D3B.12a.2 Y119D3B.12a.2 1284   III: 1202546-1207346
Transcript:Y119D3B.12a.5 Y119D3B.12a.5 1187   III: 1202546-1207264
Transcript:Y119D3B.12a.1 Y119D3B.12a.1 1483   III: 1202548-1207321