WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y119D3B.17 Sequence Name  Y119D3B.17
Length (nt)  1299   Chromosome Location  III: 1216687-1216816
Chromosome . Primary Identifier  III Chromosome Location . Start  1216687
Chromosome Location . End  1216816
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y119D3B.17

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32513 PES-4 45.3 432 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00055512
WBRNAi00036632

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y119D3B.17 1216687 1216816 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003978 pes-4 Y119D3B.17 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y119D3B.17 1216687 1216816 -1
CDS:Y119D3B.17 1217614 1217809 -1
CDS:Y119D3B.17 1218717 1218792 -1
CDS:Y119D3B.17 1219387 1219461 -1
CDS:Y119D3B.17 1219515 1219667 -1
CDS:Y119D3B.17 1220255 1220383 -1
CDS:Y119D3B.17 1221170 1221581 -1
CDS:Y119D3B.17 1221945 1222072 -1

1 Sequence

Length
1299

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y119D3B.17.2 Y119D3B.17.2 2044   III: 1215995-1230274
Transcript:Y119D3B.17.1 Y119D3B.17.1 1498   III: 1216488-1222072