Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:Y119D3A.6 | Y119D3A.6 |
2728
 |
III: 1294930-1298375 |
Other
335 Allele
| Public Name |
|---|
| WBVar02122936 |
| WBVar02124345 |
| gk963623 |
| WBVar02122814 |
| WBVar02121867 |
| gk962532 |
| WBVar02121745 |
| gk964281 |
| WBVar02120478 |
| gk964019 |
| gk964018 |
| WBVar02124403 |
| WBVar02121976 |
| WBVar02122455 |
| WBVar02120666 |
| WBVar01324148 |
| WBVar01324152 |
| WBVar01324153 |
| WBVar01324158 |
| WBVar01324161 |
| WBVar01324160 |
| WBVar01324163 |
| WBVar01324165 |
| WBVar01324164 |
| WBVar01324136 |
| WBVar01324138 |
| WBVar01324137 |
| WBVar01324141 |
| WBVar01324143 |
| WBVar01324142 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00219772 | 1294930 | 1298375 | -1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIII_1294475..1294929 | 455 | III: 1294475-1294929 | Caenorhabditis elegans |
4 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed significantly increased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type. | DESeq2, fold change > 2, FDR < 0.05. | WBPaper00066485:ogt-1(ok1474)_upregulated_neuron | |
| Transcripts that showed significantly increased expression in set-2(tm1630) animals at embryo stage, comparing to in N2 animals. | DESeq2 (v2.1.8.3) was used to determine DE genes and to generate principal component and scatter plots. DE genes with FDR < 0.05 were analysed using g:Profiler with Bonferroni correction. | WBPaper00060014:set-2(tm1630)_upregulated | |
| Transcripts that showed significantly increased expression in etr-1(lq61) comparing to in N2 animals at L1 larva stage. | DESeq2 (version 1.24.0). Transcripts with a false-discovery rate adjusted p-value less than 0.05 were considered significantly differentially expressed. | WBPaper00062325:etr-1(lq61)_upregulated | |
| Transcripts of noncoding genes that showed significantly decreased expression in muscle. | DESeq2 (version 1.24.0). Transcripts with a false-discovery rate adjusted p-value less than 0.05 were considered significantly differentially expressed. | WBPaper00062325:muscle_depleted_noncoding-RNA |