WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y82E9BL.18.1 Sequence Name  Y82E9BL.18.1
Length (nt)  1330   Chromosome Location  III: 1326790-1331066
Chromosome . Primary Identifier  III Chromosome Location . Start  1326790
Chromosome Location . End  1331066 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y82E9BL.18.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044402 Y82E9BL.18 Y82E9BL.18 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y82E9BL.18 Y82E9BL.18 915   III: 1328644-1328714

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y82E9BL.18.1 1326790 1331066 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon79422   87   III: 1326790-1326876 Caenorhabditis elegans
Exon79423   92   III: 1327432-1327523 Caenorhabditis elegans
Exon79425   98   III: 1327581-1327678 Caenorhabditis elegans
Exon79428   109   III: 1328606-1328714 Caenorhabditis elegans
Exon79429   637   III: 1329943-1330579 Caenorhabditis elegans
Exon79431   307   III: 1330760-1331066 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y82E9BL.18.1 1326790 1331066 1

1 Sequence

Length
1330

1 Sequence Ontology Term

Identifier Name Description
transcript