WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y82E9BR.9.1 Sequence Name  Y82E9BR.9.1
Length (nt)  420   Chromosome Location  III: 1359254-1359769
Chromosome . Primary Identifier  III Chromosome Location . Start  1359254
Chromosome Location . End  1359769 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y82E9BR.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022342 Y82E9BR.9 Y82E9BR.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y82E9BR.9 Y82E9BR.9 420   III: 1359254-1359498

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y82E9BR.9.1 1359254 1359769 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon79466   245   III: 1359254-1359498 Caenorhabditis elegans
Exon79467   118   III: 1359548-1359665 Caenorhabditis elegans
Exon79468   57   III: 1359713-1359769 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y82E9BR.9.1 1359254 1359769 -1

1 Sequence

Length
420

1 Sequence Ontology Term

Identifier Name Description
transcript