WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y82E9BR.32.1 Sequence Name  Y82E9BR.32.1
Length (nt)  546   Chromosome Location  III: 1379140-1380635
Chromosome . Primary Identifier  III Chromosome Location . Start  1379140
Chromosome Location . End  1380635 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y82E9BR.32.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00255597 pals-21 Y82E9BR.32 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y82E9BR.32 Y82E9BR.32 546   III: 1379140-1379370

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y82E9BR.32.1 1379140 1380635 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon79527   231   III: 1379140-1379370 Caenorhabditis elegans
Exon79528   168   III: 1379422-1379589 Caenorhabditis elegans
Exon79529   130   III: 1380434-1380563 Caenorhabditis elegans
Exon79530   17   III: 1380619-1380635 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y82E9BR.32.1 1379140 1380635 -1

1 Sequence

Length
546

1 Sequence Ontology Term

Identifier Name Description
transcript