WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y82E9BR.15.1 Sequence Name  Y82E9BR.15.1
Length (nt)  1819   Chromosome Location  III: 1414238-1417190
Chromosome . Primary Identifier  III Chromosome Location . Start  1414238
Chromosome Location . End  1417190 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y82E9BR.15.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001236 elc-1 Y82E9BR.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y82E9BR.15 Y82E9BR.15 375   III: 1415679-1415875

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y82E9BR.15.1 1414238 1417190 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon79558   1638   III: 1414238-1415875 Caenorhabditis elegans
Exon79559   181   III: 1417010-1417190 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y82E9BR.15.1 1414238 1417190 -1

1 Sequence

Length
1819

1 Sequence Ontology Term

Identifier Name Description
transcript