WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y82E9BR.22.1 Sequence Name  Y82E9BR.22.1
Length (nt)  309   Chromosome Location  III: 1406461-1409239
Chromosome . Primary Identifier  III Chromosome Location . Start  1406461
Chromosome Location . End  1409239 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y82E9BR.22.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022354 Y82E9BR.22 Y82E9BR.22 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y82E9BR.22 Y82E9BR.22 210   III: 1406559-1406714

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y82E9BR.22.1 1406461 1409239 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon79589   254   III: 1406461-1406714 Caenorhabditis elegans
Exon79590   55   III: 1409185-1409239 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y82E9BR.22.1 1406461 1409239 -1

1 Sequence

Length
309

1 Sequence Ontology Term

Identifier Name Description
transcript