WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y82E9BR.17b.5 Sequence Name  Y82E9BR.17b.5
Length (nt)  660   Chromosome Location  III: 1447496-1450703
Chromosome . Primary Identifier  III Chromosome Location . Start  1447496
Chromosome Location . End  1450703 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y82E9BR.17b.5

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022349 Y82E9BR.17 Y82E9BR.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y82E9BR.17b Y82E9BR.17b 306   III: 1447606-1447675

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y82E9BR.17b.5 1447496 1450703 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon79625   180   III: 1447496-1447675 Caenorhabditis elegans
Exon79637   99   III: 1449975-1450073 Caenorhabditis elegans
Exon79642   233   III: 1450118-1450350 Caenorhabditis elegans
Exon79649   77   III: 1450396-1450472 Caenorhabditis elegans
Exon79655   71   III: 1450633-1450703 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y82E9BR.17b.5 1447496 1450703 -1

1 Sequence

Length
660

1 Sequence Ontology Term

Identifier Name Description
transcript