WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y82E9BR.17b.4 Sequence Name  Y82E9BR.17b.4
Length (nt)  979   Chromosome Location  III: 1447500-1451120
Chromosome . Primary Identifier  III Chromosome Location . Start  1447500
Chromosome Location . End  1451120 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y82E9BR.17b.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022349 Y82E9BR.17 Y82E9BR.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y82E9BR.17b Y82E9BR.17b 306   III: 1447606-1447675

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y82E9BR.17b.4 1447500 1451120 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon79626   176   III: 1447500-1447675 Caenorhabditis elegans
Exon79636   99   III: 1449975-1450073 Caenorhabditis elegans
Exon79641   233   III: 1450118-1450350 Caenorhabditis elegans
Exon79648   77   III: 1450396-1450472 Caenorhabditis elegans
Exon79654   70   III: 1450633-1450702 Caenorhabditis elegans
Exon79659   60   III: 1450753-1450812 Caenorhabditis elegans
Exon79664   264   III: 1450857-1451120 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y82E9BR.17b.4 1447500 1451120 -1

1 Sequence

Length
979

1 Sequence Ontology Term

Identifier Name Description
transcript