WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y82E9BR.17b.3 Sequence Name  Y82E9BR.17b.3
Length (nt)  1889   Chromosome Location  III: 1447501-1452861
Chromosome . Primary Identifier  III Chromosome Location . Start  1447501
Chromosome Location . End  1452861 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y82E9BR.17b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022349 Y82E9BR.17 Y82E9BR.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y82E9BR.17b Y82E9BR.17b 306   III: 1447606-1447675

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y82E9BR.17b.3 1447501 1452861 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon79628   175   III: 1447501-1447675 Caenorhabditis elegans
Exon79635   99   III: 1449975-1450073 Caenorhabditis elegans
Exon79645   585   III: 1450118-1450702 Caenorhabditis elegans
Exon79658   60   III: 1450753-1450812 Caenorhabditis elegans
Exon79663   73   III: 1450857-1450929 Caenorhabditis elegans
Exon79668   129   III: 1451920-1452048 Caenorhabditis elegans
Exon79672   768   III: 1452094-1452861 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y82E9BR.17b.3 1447501 1452861 -1

1 Sequence

Length
1889

1 Sequence Ontology Term

Identifier Name Description
transcript