WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y82E9BR.18.2 Sequence Name  Y82E9BR.18.2
Length (nt)  2972   Chromosome Location  III: 1467876-1483495
Chromosome . Primary Identifier  III Chromosome Location . Start  1467876
Chromosome Location . End  1483495 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y82E9BR.18.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022350 Y82E9BR.18 Y82E9BR.18 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y82E9BR.18 Y82E9BR.18 2766   III: 1468064-1468180

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y82E9BR.18.2 1467876 1483495 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon79709   305   III: 1467876-1468180 Caenorhabditis elegans
Exon79712   90   III: 1469181-1469270 Caenorhabditis elegans
Exon79714   826   III: 1470527-1471352 Caenorhabditis elegans
Exon79716   174   III: 1472219-1472392 Caenorhabditis elegans
Exon79718   287   III: 1473925-1474211 Caenorhabditis elegans
Exon79721   252   III: 1474858-1475109 Caenorhabditis elegans
Exon79723   230   III: 1476266-1476495 Caenorhabditis elegans
Exon79727   536   III: 1477049-1477584 Caenorhabditis elegans
Exon79729   190   III: 1478947-1479136 Caenorhabditis elegans
Exon79730   82   III: 1483414-1483495 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y82E9BR.18.2 1467876 1483495 -1

1 Sequence

Length
2972

1 Sequence Ontology Term

Identifier Name Description
transcript