WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y82E9BR.18.1 Sequence Name  Y82E9BR.18.1
Length (nt)  2984   Chromosome Location  III: 1467876-1483507
Chromosome . Primary Identifier  III Chromosome Location . Start  1467876
Chromosome Location . End  1483507 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y82E9BR.18.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022350 Y82E9BR.18 Y82E9BR.18 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y82E9BR.18 Y82E9BR.18 2766   III: 1468064-1468180

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y82E9BR.18.1 1467876 1483507 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon79710   305   III: 1467876-1468180 Caenorhabditis elegans
Exon79711   90   III: 1469181-1469270 Caenorhabditis elegans
Exon79713   826   III: 1470527-1471352 Caenorhabditis elegans
Exon79715   174   III: 1472219-1472392 Caenorhabditis elegans
Exon79717   287   III: 1473925-1474211 Caenorhabditis elegans
Exon79720   252   III: 1474858-1475109 Caenorhabditis elegans
Exon79722   230   III: 1476266-1476495 Caenorhabditis elegans
Exon79726   536   III: 1477049-1477584 Caenorhabditis elegans
Exon79728   190   III: 1478947-1479136 Caenorhabditis elegans
Exon79731   94   III: 1483414-1483507 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y82E9BR.18.1 1467876 1483507 -1

1 Sequence

Length
2984

1 Sequence Ontology Term

Identifier Name Description
transcript