WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01G5.3.1 Sequence Name  M01G5.3.1
Length (nt)  1296   Chromosome Location  III: 1509266-1517993
Chromosome . Primary Identifier  III Chromosome Location . Start  1509266
Chromosome Location . End  1517993 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01G5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019716 tmem-120 M01G5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01G5.3 M01G5.3 1155   III: 1509407-1509628

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01G5.3.1 1509266 1517993 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon79715   363   III: 1509266-1509628 Caenorhabditis elegans
Exon79716   72   III: 1510280-1510351 Caenorhabditis elegans
Exon79717   198   III: 1510761-1510958 Caenorhabditis elegans
Exon79718   255   III: 1512881-1513135 Caenorhabditis elegans
Exon79721   56   III: 1515560-1515615 Caenorhabditis elegans
Exon79722   170   III: 1515735-1515904 Caenorhabditis elegans
Exon79723   119   III: 1517741-1517859 Caenorhabditis elegans
Exon79724   63   III: 1517931-1517993 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01G5.3.1 1509266 1517993 -1

1 Sequence

Length
1296

1 Sequence Ontology Term

Identifier Name Description
transcript