WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y22D7AL.8e.1 Sequence Name  Y22D7AL.8e.1
Length (nt)  507   Chromosome Location  III: 1583469-1586058
Chromosome . Primary Identifier  III Chromosome Location . Start  1583469
Chromosome Location . End  1586058 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y22D7AL.8e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004894 sms-3 Y22D7AL.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y22D7AL.8e Y22D7AL.8e 507   III: 1583469-1583501

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y22D7AL.8e.1 1583469 1586058 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon79873   33   III: 1583469-1583501 Caenorhabditis elegans
Exon79885   262   III: 1584627-1584888 Caenorhabditis elegans
Exon79887   212   III: 1585847-1586058 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y22D7AL.8e.1 1583469 1586058 -1

1 Sequence

Length
507

1 Sequence Ontology Term

Identifier Name Description
transcript