WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y22D7AL.9.2 Sequence Name  Y22D7AL.9.2
Length (nt)  2574   Chromosome Location  III: 1606938-1614033
Chromosome . Primary Identifier  III Chromosome Location . Start  1606938
Chromosome Location . End  1614033 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y22D7AL.9.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021247 Y22D7AL.9 Y22D7AL.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y22D7AL.9 Y22D7AL.9 2511   III: 1606994-1607030

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y22D7AL.9.2 1606938 1614033 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon79933   93   III: 1606938-1607030 Caenorhabditis elegans
Exon79936   134   III: 1607634-1607767 Caenorhabditis elegans
Exon79938   346   III: 1607820-1608165 Caenorhabditis elegans
Exon79940   537   III: 1609345-1609881 Caenorhabditis elegans
Exon79942   365   III: 1610453-1610817 Caenorhabditis elegans
Exon79944   327   III: 1611222-1611548 Caenorhabditis elegans
Exon79946   107   III: 1612169-1612275 Caenorhabditis elegans
Exon79948   162   III: 1612881-1613042 Caenorhabditis elegans
Exon79950   503   III: 1613531-1614033 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y22D7AL.9.2 1606938 1614033 -1

1 Sequence

Length
2574

1 Sequence Ontology Term

Identifier Name Description
transcript