WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y22D7AL.5a.2 Sequence Name  Y22D7AL.5a.2
Length (nt)  2113   Chromosome Location  III: 1619750-1625803
Chromosome . Primary Identifier  III Chromosome Location . Start  1619750
Chromosome Location . End  1625803 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y22D7AL.5a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002025 hsp-60 Y22D7AL.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y22D7AL.5a Y22D7AL.5a 1707   III: 1619759-1619905

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y22D7AL.5a.2 1619750 1625803 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon79956   156   III: 1619750-1619905 Caenorhabditis elegans
Exon79959   309   III: 1620055-1620363 Caenorhabditis elegans
Exon79963   393   III: 1621427-1621819 Caenorhabditis elegans
Exon79966   378   III: 1623059-1623436 Caenorhabditis elegans
Exon79970   318   III: 1624434-1624751 Caenorhabditis elegans
Exon79976   559   III: 1625245-1625803 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y22D7AL.5a.2 1619750 1625803 1

1 Sequence

Length
2113

1 Sequence Ontology Term

Identifier Name Description
transcript