WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y22D7AL.9.1 Sequence Name  Y22D7AL.9.1
Length (nt)  2640   Chromosome Location  III: 1606824-1614033
Chromosome . Primary Identifier  III Chromosome Location . Start  1606824
Chromosome Location . End  1614033 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y22D7AL.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021247 Y22D7AL.9 Y22D7AL.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y22D7AL.9 Y22D7AL.9 2511   III: 1606994-1607030

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y22D7AL.9.1 1606824 1614033 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon79969   68   III: 1606824-1606891 Caenorhabditis elegans
Exon79971   91   III: 1606940-1607030 Caenorhabditis elegans
Exon79972   134   III: 1607634-1607767 Caenorhabditis elegans
Exon79974   346   III: 1607820-1608165 Caenorhabditis elegans
Exon79976   537   III: 1609345-1609881 Caenorhabditis elegans
Exon79978   365   III: 1610453-1610817 Caenorhabditis elegans
Exon79980   327   III: 1611222-1611548 Caenorhabditis elegans
Exon79982   107   III: 1612169-1612275 Caenorhabditis elegans
Exon79984   162   III: 1612881-1613042 Caenorhabditis elegans
Exon79986   503   III: 1613531-1614033 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y22D7AL.9.1 1606824 1614033 -1

1 Sequence

Length
2640

1 Sequence Ontology Term

Identifier Name Description
transcript