WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y22D7AL.4.1 Sequence Name  Y22D7AL.4.1
Length (nt)  1196   Chromosome Location  III: 1626632-1637318
Chromosome . Primary Identifier  III Chromosome Location . Start  1626632
Chromosome Location . End  1637318 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y22D7AL.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021244 Y22D7AL.4 Y22D7AL.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y22D7AL.4 Y22D7AL.4 1167   III: 1626639-1626771

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y22D7AL.4.1 1626632 1637318 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon79977   140   III: 1626632-1626771 Caenorhabditis elegans
Exon79979   155   III: 1629410-1629564 Caenorhabditis elegans
Exon79980   201   III: 1629880-1630080 Caenorhabditis elegans
Exon79999   566   III: 1635795-1636360 Caenorhabditis elegans
Exon80000   134   III: 1637185-1637318 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y22D7AL.4.1 1626632 1637318 1

1 Sequence

Length
1196

1 Sequence Ontology Term

Identifier Name Description
transcript