WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y22D7AL.11b.1 Sequence Name  Y22D7AL.11b.1
Length (nt)  1320   Chromosome Location  III: 1630783-1633792
Chromosome . Primary Identifier  III Chromosome Location . Start  1630783
Chromosome Location . End  1633792 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y22D7AL.11b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021249 Y22D7AL.11 Y22D7AL.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y22D7AL.11b Y22D7AL.11b 1245   III: 1630818-1630955

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y22D7AL.11b.1 1630783 1633792 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon79982   173   III: 1630783-1630955 Caenorhabditis elegans
Exon79984   110   III: 1631007-1631116 Caenorhabditis elegans
Exon79986   130   III: 1631553-1631682 Caenorhabditis elegans
Exon79988   252   III: 1632021-1632272 Caenorhabditis elegans
Exon79990   169   III: 1632421-1632589 Caenorhabditis elegans
Exon79992   131   III: 1632636-1632766 Caenorhabditis elegans
Exon79994   138   III: 1632905-1633042 Caenorhabditis elegans
Exon79996   151   III: 1633217-1633367 Caenorhabditis elegans
Exon79997   66   III: 1633727-1633792 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y22D7AL.11b.1 1630783 1633792 -1

1 Sequence

Length
1320

1 Sequence Ontology Term

Identifier Name Description
transcript