WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y22D7AL.14.1 Sequence Name  Y22D7AL.14.1
Length (nt)  1224   Chromosome Location  III: 1653723-1657480
Chromosome . Primary Identifier  III Chromosome Location . Start  1653723
Chromosome Location . End  1657480 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y22D7AL.14.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021252 cht-4 Y22D7AL.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y22D7AL.14 Y22D7AL.14 1083   III: 1653807-1653991

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y22D7AL.14.1 1653723 1657480 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80003   269   III: 1653723-1653991 Caenorhabditis elegans
Exon80004   73   III: 1654036-1654108 Caenorhabditis elegans
Exon80005   162   III: 1654168-1654329 Caenorhabditis elegans
Exon80006   133   III: 1655241-1655373 Caenorhabditis elegans
Exon80007   104   III: 1655507-1655610 Caenorhabditis elegans
Exon80008   156   III: 1656269-1656424 Caenorhabditis elegans
Exon80009   327   III: 1657154-1657480 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y22D7AL.14.1 1653723 1657480 -1

1 Sequence

Length
1224

1 Sequence Ontology Term

Identifier Name Description
transcript