WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y22D7AR.5.1 Sequence Name  Y22D7AR.5.1
Length (nt)  901   Chromosome Location  III: 1665831-1668619
Chromosome . Primary Identifier  III Chromosome Location . Start  1665831
Chromosome Location . End  1668619 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y22D7AR.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021259 glb-30 Y22D7AR.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y22D7AR.5 Y22D7AR.5 819   III: 1665913-1666194

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y22D7AR.5.1 1665831 1668619 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon80021   364   III: 1665831-1666194 Caenorhabditis elegans
Exon80022   139   III: 1666884-1667022 Caenorhabditis elegans
Exon80023   72   III: 1667150-1667221 Caenorhabditis elegans
Exon80024   107   III: 1667290-1667396 Caenorhabditis elegans
Exon80025   52   III: 1667876-1667927 Caenorhabditis elegans
Exon80026   96   III: 1667978-1668073 Caenorhabditis elegans
Exon80027   71   III: 1668549-1668619 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y22D7AR.5.1 1665831 1668619 -1

1 Sequence

Length
901

1 Sequence Ontology Term

Identifier Name Description
transcript