WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00198479 Gene Name  Y22D7AR.19
Sequence Name  ? Y22D7AR.19 Organism  Caenorhabditis elegans
Automated Description  Is affected by elli-1 based on microarray studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 53
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00198479

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y22D7AR.19 Y22D7AR.19 53   III: 1734020-1734072
 

Other

0 CDSs

0 RNAi Result

6 Allele

Public Name
gk962532
gk964281
gkDf40
gk345509
gk445394
gk686651

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00198479 1734020 1734072 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIII_1734073..1743248   9176 III: 1734073-1743248 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in elli-1(sam-3) comparing to in N2 animals, accordingto tiling array analysis. Fold change > 1.2, q-value < 0.05. WBPaper00050743:elli-1(sam-3)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00198479 1734020 1734072 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
53

1 Sequence Ontology Term