WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39A3CL.4a Sequence Name  Y39A3CL.4a
Length (nt)  1236   Chromosome Location  III: 1772646-1772831
Chromosome . Primary Identifier  III Chromosome Location . Start  1772646
Chromosome Location . End  1772831
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39A3CL.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37425 Y39A3CL.4, isoform a 46.4 411 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00078610
WBRNAi00056147
WBRNAi00020017
WBRNAi00020362
WBRNAi00078598

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39A3CL.4a 1772646 1772831 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021442 Y39A3CL.4 Y39A3CL.4 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39A3CL.4a 1772646 1772831 -1
CDS:Y39A3CL.4a 1773998 1774250 -1
CDS:Y39A3CL.4a 1774861 1775123 -1
CDS:Y39A3CL.4a 1775505 1775627 -1
CDS:Y39A3CL.4a 1775898 1776001 -1
CDS:Y39A3CL.4a 1777087 1777225 -1
CDS:Y39A3CL.4a 1777271 1777417 -1
CDS:Y39A3CL.4a 1777503 1777523 -1

1 Sequence

Length
1236

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39A3CL.4a.1 Y39A3CL.4a.1 1450   III: 1772517-1777608